Improve Research Reproducibility A Bio-protocol resource

OrigamiFISH: A universal, label-free, single-molecule method to visualize DNA origami nanodevices across biological samples

Speaker: Wendy Xueyi Wang

Online live: Dec 10, 2024 12:00 PM EST Posted: Dec 20, 2024 Views: 6995

Q&A Q&A

Abstract

Structural DNA nanotechnology has enabled the creation of user-defined DNA origami nanostructures (DNs) for diverse applications such as drug delivery, vaccines, and biosensors. However, understanding DN interactions and distribution within cells and tissues has been limited by the drawbacks of current tracking methods, including low sensitivity and dye-induced artifacts.

OrigamiFISH addresses these challenges by targeting conserved DN scaffold sequences with hybridization chain reaction probes, achieving thousand-fold signal amplification. This innovative technique reveals cell type–specific and DN shape–specific distribution patterns within minutes of uptake at picomolar concentrations, far surpassing the sensitivity of existing methods. Additionally, origamiFISH is optimized for compatibility with immunofluorescence and tissue clearing, enabling detailed visualization of DN distribution in various biological contexts.

This webinar will cover the principles of origamiFISH, demonstrate its application in visualizing DNs across different microscopy modalities, and discuss its potential for advancing DN-based therapeutic development. 


Highlights

- Introduction to origamiFISH

- Technical innovations and biological applications of origamiFISH

- Compatibility and visualization techniques associated with origamiFISH

- Impact on DNA Nanotechnology

Speaker

Wendy Xueyi Wang

Wendy Xueyi Wang, Ph.D.

Damon Runyon postdoctoral fellow, Broad Institute

Dr. Wendy Xueyi Wang is currently a Damon Runyon postdoctoral fellow in Dr. Xiao Wang's lab at the Broad Institute, where she works on developing s...

View more View less more less

References

1.

Wendy Xueyi Wang, Travis R Douglas, Haiwang Zhang, Afrin Bhattacharya, Meghan Rothenbroker, Wentian Tang, Yu Sun, Zhengping Jia, Julien Muffat , Yun Li , Leo Y T Chou Universal, label-free, single-molecule visualization of DNA origami nanodevices across biological samples using origamiFISH, Nature Nanotechnol., 2024 (https://pubmed.ncbi.nlm.nih.gov/37500778/)

2.

Alexander S, Wang WX, Tseng CY, Douglas TR, Chou LYT. High-Throughput, Label-Free Detection of DNA Origami in Single-Cell Suspensions Using origamiFISH-Flow. Small. 2024 Apr 30:e2400236. doi: 10.1002/smll.202400236. Epub ahead of print. PMID: 38686679. https://onlinelibrary.wiley.com/doi/full/10.1002/smll.202400236

Do you have a question about this webinar?

Post your question, and we'll invite the webinar speaker to respond. You're welcome to join the discussion by answering or commenting on questions ( Note: Not all questions, especially those not directly relevant to the webinar topic, may be answered by the speaker. ).

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question.

post Post a Question

16 Q&A

Do you have recorded videos of the past webinars

edit 1 Answer 10 Views Dec 4, 2024
Wenrui Cui Wenrui Cui

You can access the recordings of previous webinars by following this link.

helpful 0 helpful
Join Discussion

The cost to apply it to C. elegans (tiny nematode)

The cost to apply it to C. elegans (tiny nematode)

edit 0 Answer 1 View Dec 4, 2024

How cost-effective and easy to use is this technology?

For labs which are resource-limited how will this technology help.


edit 0 Answer 0 View Dec 3, 2024