发布: 2014年03月20日第4卷第6期 DOI: 10.21769/BioProtoc.1076 浏览次数: 8927
评审: Anonymous reviewer(s)
Abstract
This protocol is a simple method for evaluating mutation frequency during African swine fever virus (ASFV) replication, although it could be used also for other DNA viruses (poxvirus, herpesvirus, mimivirus, etc) with minor modifications. In the original Carrascosa et al. (1982), the protocol was carried out with two cloned viruses, BA71Vc (a purified clone from BA71V wild type strain) and vΔpolX (lacking the reparative polymerase, pol X, gene), and two different cell types that can be infected by ASFV, Vero cells and swine macrophages. To facilitate the sequence comparison, a genome fragment containing the B646L gene was amplified by PCR and blunt-end cloned. This gene codes for the major capsid protein (p72) and multiple sequences can be found in the database, so the mutations found could be compared with natural gene variations. The cloned fragment can be either sequenced directly from bacteria colonies or from miniprep purified DNA.
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文章信息
版权信息
© 2014 The Authors; exclusive licensee Bio-protocol LLC.
如何引用
Redrejo-Rodríguez, M., Rodríguez, J. M., Suárez, C. and Salas, M. L. (2014). Determination of Mutation Frequency During Viral DNA Replication. Bio-protocol 4(6): e1076. DOI: 10.21769/BioProtoc.1076.
分类
微生物学 > 微生物遗传学 > DNA
分子生物学 > DNA > 诱/突变
分子生物学 > DNA > PCR
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