Welcome guest, Sign in

Home


Kate Dreher

Education

Ph.D. in Plant Biology , University of California, Davis, United States of America, 2007

Current position

Germplasm Data Coordinator, International Maize and Wheat Improvement Center (CIMMYT), Mexico

Publications (since 2010)

  1. Kim, T., Dreher, K., Nilo-Poyanco, R., Lee, I., Fiehn, O., Lange, B. M., Nikolau, B. J., Sumner, L., Welti, R., Wurtele, E. S. and Rhee, S. Y. (2015). Patterns of metabolite changes identified from large-scale gene perturbations in Arabidopsis using a genome-scale metabolic network. Plant Physiol 167(4): 1685-1698.

  2. Dreher, K. (2014). Putting The Plant Metabolic Network pathway databases to work: going offline to gain new capabilities. Methods Mol Biol 1083: 151-171.

  3. Caspi, R., Dreher, K. and Karp, P. D. (2013). The challenge of constructing, classifying, and representing metabolic pathways. FEMS Microbiol Lett 345(2): 85-93.

  4. Lamesch, P., Berardini, T. Z., Li, D., Swarbreck, D., Wilks, C., Sasidharan, R., Muller, R., Dreher, K., Alexander, D. L., Garcia-Hernandez, M., Karthikeyan, A. S., Lee, C. H., Nelson, W. D., Ploetz, L., Singh, S., Wensel, A. and Huala, E. (2012). The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res 40(Database issue): D1202-1210.

  5. Zhang, P., Dreher, K., Karthikeyan, A., Chi, A., Pujar, A., Caspi, R., Karp, P., Kirkup, V., Latendresse, M., Lee, C., Mueller, L. A., Muller, R. and Rhee, S. Y. (2010). Creation of a genome-wide metabolic pathway database for Populus trichocarpa using a new approach for reconstruction and curation of metabolic pathways for plants. Plant Physiol 153(4): 1479-1491.

  6. Lamesch, P., Dreher, K., Swarbreck, D., Sasidharan, R., Reiser, L. and Huala, E. (2010). Using the Arabidopsis information resource (TAIR) to find information about Arabidopsis genes. Curr Protoc Bioinformatics Chapter 1: Unit1 11.

  7. Caspi, R., Altman, T., Dale, J. M., Dreher, K., Fulcher, C. A., Gilham, F., Kaipa, P., Karthikeyan, A. S., Kothari, A., Krummenacker, M., Latendresse, M., Mueller, L. A., Paley, S., Popescu, L., Pujar, A., Shearer, A. G., Zhang, P. and Karp, P. D. (2010). The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res 38(Database issue): D473-479.

  8. Bais, P., Moon, S. M., He, K., Leitao, R., Dreher, K., Walk, T., Sucaet, Y., Barkan, L., Wohlgemuth, G., Roth, M. R., Wurtele, E. S., Dixon, P., Fiehn, O., Lange, B. M., Shulaev, V., Sumner, L. W., Welti, R., Nikolau, B. J., Rhee, S. Y. and Dickerson, J. A. (2010). PlantMetabolomics.org: a web portal for plant metabolomics experiments. Plant Physiol 152(4): 1807-1816.

Protocols by Kate Dreher
  1. Cycloheximide Assays to Measure Protein Degradation in vivo in Plants