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Michael J. Sadowksy

Education

Ph.D. in Microbiology, University of Hawaii, Honolulu, Hawaii, 1983

Current position

Director BioTechnology Institute, University of Minnesota, Saint Paul, USA (2009-present)

Publications 2010-2015 (out of 265 referred publications)

  1. Heisel, T., Podgorski, H., Staley, C. M., Knights, D., Sadowsky, M. J. and Gale, C. A. (2015). Complementary amplicon-based genomic approaches for the study of fungal communities in humans. PLoS One 10(2): e0116705.
  2. Song, Z., Vail, A., Sadowsky, M. J. and Schilling, J. S. (2015). Influence of hyphal inoculum potential on the competitive success of Fungi colonizing wood. Microb Ecol 69(4): 758-767.
  3. Unno, T., Kim, J., Kim, Y., Nguyen, S. G., Guevarra, R. B., Kim, G. P., Lee, J. H. and Sadowsky, M. J. (2015). Influence of seawater intrusion on microbial communities in groundwater. Sci Total Environ 532: 337-343.
  4. Weingarden, A., González, A., Vázquez-Baeza, Y., Weiss, S., Humphry, G., Berg-Lyons, D., Knights, D., Unno, T., Bobr, A., Kang, J., Khoruts, A., Knight, R. and Sadowsky, M. J. (2015). Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difficile infection. Microbiome 3: 10.
  5. Narożna, D., Pudelko, K., Króliczak, J., Golińska, B., Sugawara, M., Madrzak, C. J. and Sadowsky, M. J. (2015). Survival and competitiveness of bradyrhizobium japonicum strains 20 years after introduction into field locations in poland. Appl Environ Microbiol 81(16): 5552-5559. Epub ahead of print
  6. Ghosh, S., LaPara, T. M. and Sadowsky, M. J. (2015). Transformation of tetracycline by TetX and its subsequent degradation in a heterologous host. FEMS Microbiol Ecol 91(6).
  7. Epstein, B., Sadowsky, M. J. and Tiffin, P. (2015). Selection on horizontally transferred and duplicated genes in sinorhizobium (ensifer), the root-nodule symbionts of medicago. Genome Biol Evol 7(5): 1329-1330.
  8. Li, X., Harwood, V. J., Nayak, B., Staley, C., Sadowsky, M. J. and Weidhaas, J. (2015). A novel microbial source tracking microarray for pathogen detection and fecal source identification in environmental systems. Environ Sci Technol 49(12): 7319-7329.
  9. Wongphatcharachai, M., Staley, C., Wang, P., Moncada, K. M., Sheaffer, C. C. and Sadowsky, M. J. (2015). Predominant populations of indigenous soybean-nodulating bradyrhizobium japonicum strains obtained from organic farming systems in Minnesota. J Appl Microbiol 118(5): 1152-1164.
  10. Unno, T., Choi, J. H., Hur, H. G., Sadowsky, M. J., Ahn, Y. T., Huh, C. S., Kim, G. B. and Cha, C. J. (2015). Changes in human gut microbiota influenced by probiotic fermented milk ingestion. J Dairy Sci 98(6): 3568-3576.
  11. Lan Chun, C., Kahn, C. I., Borchert, A. J., Byappanahalli, M. N., Whitman, R. L., Peller, J., Pier, C., Lin, G., Johnson, E. A. and Sadowsky, M. J. (2015). Prevalence of toxin-producing Clostridium botulinum associated with the macroalga Cladophora in three Great Lakes: growth and management. Sci Total Environ 511: 523-529. 
  12. Kandil, M. M., Trigo, C., Koskinen, W. C. and Sadowsky, M. J. (2015). Isolation and characterization of a novel imidacloprid-degrading Mycobacterium sp. strain MK6 from an egyptian soil. J Agric Food Chem 63(19): 4721-4727. 
  13. Staley, C., Johnson, D., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2015). Frequencies of heavy metal resistance are associated with land cover type in the Upper Mississippi River. Sci Total Environ 511: 461-468.
  14. Staley, C., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2015). Evaluation of water sampling methodologies for amplicon-based characterization of bacterial community structure. J Microbiol Methods 114: 43-50.
  15. Staley, C., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2015). Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River. Sci Total Environ 505: 435-445.
  16. Khoruts, A., Sadowsky, M. J. and Hamilton, M. J. (2015). Development of fecal microbiota transplantation suitable for mainstream medicine. Clin Gastroenterol Hepatol 13(2): 246-250.
  17. Staley, C., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2015). Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River. Sci Total Environ 505: 435-445.
  18. Staley, C., Johnson, D., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2015). Frequencies of heavy metal resistance are associated with land cover type in the Upper Mississippi River. Sci Total Environ 511: 461-468.
  19. Dodge, A. G., Carrasquillo, K., Rivera, L., Xu, L., Wackett, L. P. and Sadowsky, M. J. (2015). Rapid method using two microbial enzymes for detection of L-abrine in food as a marker for the toxic protein abrin. Appl Environ Microbiol 81(5): 1610-1615.
  20. Vail, A. W., Wang, P., Uefuji, H., Samac, D. A., Vance, C. P., Wackett, L. P. and Sadowsky, M. J. (2015). Biodegradation of atrazine by three transgenic grasses and alfalfa expressing a modified bacterial atrazine chlorohydrolase gene. Transgenic Res 24(3): 475-488.
  21. Guentzel, K. S., Hondzo, M., Badgley, B. D., Finlay, J. C., Sadowsky, M. J. and Kozarek, J. L. (2014). Measurement and modeling of denitrification in sand-bed streams under various land uses. J Environ Qual 43(3): 1013-1023.
  22. Staley, C., Dunny, G. M. and Sadowsky, M. J. (2014). Environmental and animal-associated enterococci. Adv Appl Microbiol 87: 147-186.
  23. Whitman, R., Harwood, V. J., Edge, T. A., Nevers, M., Byappanahalli, M., Vijayavel, K., Brandão, J., Sadowsky, M. J., Alm, E. W., Crowe, A., Ferguson, D., Ge, Z., Halliday, E., Kinzelman, J., Kleinheinz, G., Przybyla-Kelly, K., Staley, C., Staley, Z. and Solo-Gabriele, H. M. (2014). Microbes in beach sands: Integrating environment, ecology and public health. 13(3): 329-368.
  24. Scholz, F., Badgley, B. D., Sadowsky, M. J. and Kaplan, D. H. (2014). Immune mediated shaping of microflora community composition depends on barrier site. PLoS One 9(1): e84019. 
  25. Staley, C., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2014). Bacterial community structure is indicative of chemical inputs in the Upper Mississippi River. Front Microbiol 5: 524. 
  26. Weingarden, A. R., Chen, C., Bobr, A., Yao, D., Lu, Y., Nelson, V. M., Sadowsky, M. J. and Khoruts, A. (2014). Microbiota transplantation restores normal fecal bile acid composition in recurrent Clostridium difficile infection. Am J Physiol Gastrointest Liver Physiol 306(4): G310-319.
  27. Yang, H., Krumholz, E. W., Brutinel, E. D., Palani, N. P., Sadowsky, M. J., Odlyzko, A. M., Gralnick, J. A. and Libourel, I. G. (2014). Genome-scale metabolic network validation of Shewanella oneidensis using transposon insertion frequency analysis. PLoS Comput Biol 10(9): e1003848.
  28. Olchanheski, L. R., Dourado, M. N., Beltrame, F. L., Zielinski, A. A., Demiate, I. M., Pileggi, S. A., Azevedo, R. A., Sadowsky, M. J. and Pileggi, M. (2014). Mechanisms of tolerance and high degradation capacity of the herbicide mesotrione by Escherichia coli strain DH5-alpha. PLoS One 9(6): e99960.
  29. Hansen, A. T., Hondzo, M., Sheng, J. and Sadowsky, M. J. (2014). Microscale measurements reveal contrasting effects of photosynthesis and epiphytes on frictional drag on the surfaces of filamentous algae. Freshwater Biol 59(2).
  30. Shamseldin, A., Moawad, H., Abd El-Rahim, W. M. and Sadowsky, M. J. (2014). Near-full length sequencing of 16S rDNA and RFLP indicates that Rhizobium etli is the dominant species nodulating Egyptian winter Berseem clover (Trifolium alexandrinum L.). Syst Appl Microbiol 37(2): 121-128. 
  31. Martínez-Vaz, B. M., Fink, R. C., Diez-Gonzalez, F. and Sadowsky, M. J. (2014). Enteric pathogen-plant interactions: molecular connections leading to colonization and growth and implications for food safety. Microbes Environ 29(2): 123-135.
  32. Shankar, V., Hamilton, M. J., Khoruts, A., Kilburn, A., Unno, T., Paliy, O. and Sadowsky, M. J. (2014). Species and genus level resolution analysis of gut microbiota in Clostridium difficile patients following fecal microbiota transplantation. Microbiome 2: 13.
  33. Eichmiller, J. J., Borchert, A. J., Sadowsky, M. J. and Hicks, R. E. (2014). Decay of genetic markers for fecal bacterial indicators and pathogens in sand from Lake Superior. Water Res 59: 99-111. 
  34. Burch, T. R., Sadowsky, M. J. and LaPara, T. M. (2014). Fate of antibiotic resistance genes and class 1 integrons in soil microcosms following the application of treated residual municipal wastewater solids. Environ Sci Technol 48(10): 5620-5627. 
  35. Jang, J., Di, D. Y., Lee, A., Unno, T., Sadowsky, M. J. and Hur, H. G. (2014). Seasonal and genotypic changes in Escherichia coli phylogenetic groups in the Yeongsan River basin of South Korea. PLoS One 9(7): e100585.
  36. Sugawara, M. and Sadowsky, M. J. (2014). Enhanced nodulation and nodule development by nolR mutants of Sinorhizobium medicae on specific Medicago host genotypes. Mol Plant Microbe Interact 27(4): 328-335.
  37. Staley, C., Gould, T. J., Wang, P., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2014). Core functional traits of bacterial communities in the Upper Mississippi River show limited variation in response to land cover. Front Microbiol 5: 414.
  38. Ghosh, S., LaPara, T. M. and Sadowsky, M. J. (2014). Draft genome sequence of Sphingobacterium sp. strain PM2-P1-29, a tetracycline-degrading TetX-Expressing aerobic Bacterium isolated from agricultural soil. Genome Announc 2(5). 
  39. Scholz, F., Badgley, B. D., Sadowsky, M. J. and Kaplan, D. H. (2014). Immune mediated shaping of microflora community composition depends on barrier site. PLoS One 9(1): e84019.
  40. Chunjaturas, W., Ferguson, J. A., Rattanapichai, W., Sadowsky, M. J. and Sajjaphan, K. (2014). Shift of bacterial community structure in two Thai soil series affected by silver nanoparticles using ARISA. World J Microbiol Biotechnol 30(7): 2119-2124.
  41. Crook, M. B., Mitra, S., Ané, J. M., Sadowsky, M. J. and Gyaneshwar, P. (2013). Complete genome sequence of the sesbania symbiont and rice growth-promoting endophyte rhizobium sp. strain IRBG74. Genome Announc 1(6).
  42. Han, D., Sadowsky, M. J., Chong, Y. and Hur, H. G. (2013). Characterization of a self-sufficient trans-anethole oxygenase from Pseudomonas putida JYR-1. PLoS One 8(9): e73350.
  43. Welty, N. E., Staley, C., Ghilardi, N., Sadowsky, M. J., Igyártó, B. Z. and Kaplan, D. H. (2013). Intestinal lamina propria dendritic cells maintain T cell homeostasis but do not affect commensalism. J Exp Med 210(10): 2011-2024.
  44. Ryu, J. Y., Seo, J., Park, S., Ahn, J. H., Chong, Y., Sadowsky, M. J. and Hur, H. G. (2013). Characterization of an isoeugenol monooxygenase (Iem) from Pseudomonas nitroreducens Jin1 that transforms isoeugenol to vanillin. Biosci Biotechnol Biochem 77(2): 289-294.
  45. Staley, C., Unno, T., Gould, T. J., Jarvis, B., Phillips, J., Cotner, J. B. and Sadowsky, M. J. (2013). Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River. J Appl Microbiol 115(5): 1147-1158.
  46. Stanton-Geddes, J., Paape, T., Epstein, B., Briskine, R., Yoder, J., Mudge, J., Bharti, A. K., Farmer, A. D., Zhou, P., Denny, R., May, G. D., Erlandson, S., Yakub, M., Sugawara, M., Sadowsky, M. J., Young, N. D. and Tiffin, P. (2013). Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula. PLoS One 8(5): e65688.
  47. Jiang, S., Park, S., Yoon, Y., Lee, J. H., Wu, W. M., Phuoc Dan, N., Sadowsky, M. J. and Hur, H. G. (2013). Methanogenesis facilitated by geobiochemical iron cycle in a novel syntrophic methanogenic microbial community. Environ Sci Technol 47(17): 10078-10084.
  48. Hou, Z., Fink, R. C., Radtke, C., Sadowsky, M. J. and Diez-Gonzalez, F. (2013). Incidence of naturally internalized bacteria in lettuce leaves. Int J Food Microbiol 162(3): 260-265.
  49. Eichmiller, J. J., Hicks, R. E. and Sadowsky, M. J. (2013). Distribution of genetic markers of fecal pollution on a freshwater sandy shoreline in proximity to wastewater effluent. Environ Sci Technol 47(7): 3395-3402.
  50. Hou, Z., Fink, R. C., Sugawara, M., Diez-Gonzalez, F. and Sadowsky, M. J. (2013). Transcriptional and functional responses of Escherichia coli O157:H7 growing in the lettuce rhizoplane. Food Microbiol 35(2): 136-142. 
  51. Ebentier, D. L., Hanley, K. T., Cao, Y., Badgley, B. D., Boehm, A. B., Ervin, J. S., Goodwin, K. D., Gourmelon, M., Griffith, J. F., Holden, P. A., Kelty, C. A., Lozach, S., McGee, C., Peed, L. A., Raith, M., Ryu, H., Sadowsky, M. J., Scott, E. A., Santo Domingo, J., Schriewer, A., Sinigalliano, C. D., Shanks, O. C., Van De Werfhorst, L. C., Wang, D., Wuertz, S. and Jay, J. A. (2013). Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods. Water Res 47(18): 6839-6848.
  52. Chun, C. L., Ochsner, U., Byappanahalli, M. N., Whitman, R. L., Tepp, W. H., Lin, G., Johnson, E. A., Peller, J. and Sadowsky, M. J. (2013). Association of toxin-producing Clostridium botulinum with the macroalga Cladophora in the Great Lakes. Environ Sci Technol 47(6): 2587-2594.
  53. Sinigalliano, C. D., Ervin, J. S., Van De Werfhorst, L. C., Badgley, B. D., Ballesté, E., Bartkowiak, J., Boehm, A. B., Byappanahalli, M., Goodwin, K. D., Gourmelon, M., Griffith, J., Holden, P. A., Jay, J., Layton, B., Lee, C., Lee, J., Meijer, W. G., Noble, R., Raith, M., Ryu, H., Sadowsky, M. J., Schriewer, A., Wang, D., Wanless, D., Whitman, R., Wuertz, S. and Santo Domingo, J. W. (2013). Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources. Water Res 47(18): 6883-6896.
  54. Cao, Y., Van De Werfhorst, L. C., Dubinsky, E. A., Badgley, B. D., Sadowsky, M. J., Andersen, G. L., Griffith, J. F. and Holden, P. A. (2013). Evaluation of molecular community analysis methods for discerning fecal sources and human waste. Water Res 47(18): 6862-6872.
  55. Burch, T. R., Sadowsky, M. J. and LaPara, T. M. (2013). Air-drying beds reduce the quantities of antibiotic resistance genes and class 1 integrons in residual municipal wastewater solids. Environ Sci Technol 47(17): 9965-9971.
  56. Sugawara, M., Epstein, B., Badgley, B. D., Unno, T., Xu, L., Reese, J., Gyaneshwar, P., Denny, R., Mudge, J., Bharti, A. K., Farmer, A. D., May, G. D., Woodward, J. E., Medigue, C., Vallenet, D., Lajus, A., Rouy, Z., Martinez-Vaz, B., Tiffin, P., Young, N. D. and Sadowsky, M. J. (2013). Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies. Genome Biol 14(2): R17.
  57. Ran, Q., Badgley, B. D., Dillon, N., Dunny, G. M. and Sadowsky, M. J. (2013). Occurrence, genetic diversity, and persistence of enterococci in a Lake Superior watershed. Appl Environ Microbiol 79(9): 3067-3075.
  58. Volzing, K., Borrero, J., Sadowsky, M. J. and Kaznessis, Y. N. (2013). Antimicrobial peptides targeting Gram-negative pathogens, produced and delivered by lactic acid bacteria. ACS Synth Biol 2(11): 643-650.
  59. Giraud, E., Xu, L., Chaintreuil, C., Gargani, D., Gully, D. and Sadowsky, M. J. (2013). Photosynthetic Bradyrhizobium sp. strain ORS285 is capable of forming nitrogen-fixing root nodules on soybeans (Glycine max). Appl Environ Microbiol 79(7): 2459-2462.
  60. Hamilton, M. J., Weingarden, A. R., Unno, T., Khoruts, A. and Sadowsky, M. J. (2013). High-throughput DNA sequence analysis reveals stable engraftment of gut microbiota following transplantation of previously frozen fecal bacteria. Gut Microbes 4(2): 125-135.
  61. Jang, J., Suh, Y. S., Di, D. Y., Unno, T., Sadowsky, M. J. and Hur, H. G. (2013). Pathogenic Escherichia coli strains producing extended-spectrum beta-lactamases in the Yeongsan River basin of South Korea. Environ Sci Technol 47(2): 1128-1136.
  62. Burch, T. R., Sadowsky, M. J. and Lapara, T. M. (2013). Aerobic digestion reduces the quantity of antibiotic resistance genes in residual municipal wastewater solids. Front Microbiol 4: 17.
  63. Sugawara, M. and Sadowsky, M. J. (2013). Influence of elevated atmospheric carbon dioxide on transcriptional responses of Bradyrhizobium japonicum in the soybean rhizoplane. Microbes Environ 28(2): 217-227.
  64. Seo, J., Ryu, J. Y., Han, J., Ahn, J. H., Sadowsky, M. J., Hur, H. G. and Chong, Y. (2013). Amino acid substitutions in naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4 result in regio- and stereo-specific hydroxylation of flavanone and isoflavanone. Appl Microbiol Biotechnol 97(2): 693-704.
  65. Weingarden, A. R., Hamilton, M. J., Sadowsky, M. J. and Khoruts, A. (2013). Resolution of severe Clostridium difficile infection following sequential fecal microbiota transplantation. J Clin Gastroenterol 47(8): 735-737. 
  66. Strong, L., Gould, T., Kasinkas, L., Sadowsky, M., Aksan, A. and Wackett, L. (2013). Biodegradation in waters from hydraulic fracturing: Chemistry, microbiology, and engineering. J Environ Eng 10.1061/(ASCE)EE 1943-7870.
  67. Kannappan, V., Sadowsky, M. J., Ferguson, J. A. and Kashian, D. R. (2013). The establishment of the nuisance cyanobacteria Lyngbya wollei in Lake St. Clair and its potential to harbor fecal indicator bacteria. J Great Lakes Res 39:560-568.
  68. Seffernick, J. L., Erickson, J. S., Cameron, S. M., Cho, S., Dodge, A. G., Richman, J. E., Sadowsky, M. J. and Wackett, L. P. (2012). Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family. J Bacteriol 194(17): 4579-4588.
  69. Epstein, B., Branca, A., Mudge, J., Bharti, A. K., Briskine, R., Farmer, A. D., Sugawara, M., Young, N. D., Sadowsky, M. J. and Tiffin, P. (2012). Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae. PLoS Genet 8(8): e1002868.
  70. Hou, Z., Fink, R. C., Black, E. P., Sugawara, M., Zhang, Z., Diez-Gonzalez, F. and Sadowsky, M. J. (2012). Gene expression profiling of Escherichia coli in response to interactions with the lettuce rhizosphere. J Appl Microbiol 113(5): 1076-1086.
  71. Ryu, J. Y., Seo, J., Ahn, J. H., Sadowsky, M. J. and Hur, H. G. (2012). Transcriptional control of the isoeugenol monooxygenase of Pseudomonas nitroreducens Jin1 in Escherichia coli. Biosci Biotechnol Biochem 76(10): 1891-1896.
  72. Hamilton, M. J., Weingarden, A. R., Sadowsky, M. J. and Khoruts, A. (2012). Standardized frozen preparation for transplantation of fecal microbiota for recurrent Clostridium difficile infection. Am J Gastroenterol 107(5): 761-767. 
  73. Byappanahalli, M. N., Yan, T., Hamilton, M. J., Ishii, S., Fujioka, R. S., Whitman, R. L. and Sadowsky, M. J. (2012). The population structure of Escherichia coli isolated from subtropical and temperate soils. Sci Total Environ 417-418: 273-279.
  74. Song, Z., Vail, A., Sadowsky, M. J. and Schilling, J. S. (2012). Competition between two wood-degrading fungi with distinct influences on residues. FEMS Microbiol Ecol 79(1): 109-117.
  75. Fink, R. C., Black, E. P., Hou, Z., Sugawara, M., Sadowsky, M. J. and Diez-Gonzalez, F. (2012). Transcriptional responses of Escherichia coli K-12 and O157:H7 associated with lettuce leaves. Appl Environ Microbiol 78(6): 1752-1764. 
  76. Pileggi, M., Pileggi, S. A., Olchanheski, L. R., da Silva, P. A., Munoz Gonzalez, A. M., Koskinen, W. C., Barber, B. and Sadowsky, M. J. (2012). Isolation of mesotrione-degrading bacteria from aquatic environments in Brazil. Chemosphere 86(11): 1127-1132.
  77. Reátegui, E., Reynolds, E., Kasinkas, L., Aggarwal, A., Sadowsky, M. J., Aksan, A. and Wackett, L. P. (2012). Silica gel-encapsulated AtzA biocatalyst for atrazine biodegradation. Appl Microbiol Biotechnol 96(1): 231-240.
  78. Dodge, A. G., Wackett, L. P. and Sadowsky, M. J. (2012). Plasmid localization and organization of melamine degradation genes in Rhodococcus sp. strain Mel. Appl Environ Microbiol 78(5): 1397-1403.
  79. Unno, T., Di, D. Y., Jang, J., Suh, Y. S., Sadowsky, M. J. and Hur, H. G. (2012). Integrated online system for a pyrosequencing-based microbial source tracking method that targets Bacteroidetes 16S rDNA. Environ Sci Technol 46(1): 93-98. 
  80. Jareonmit, P., Mehta, M., Sadowsky, M. J. and Sajjaphan, K. (2012). Phylogenetic and phenotypic analyses of arsenic-reducing bacteria isolated from an old tin mine area in Thailand. World J Microbiol Biotechnol 28(5): 2287-2292.
  81. Chen, B., Gong, H., Zhang, X., Patankar, P. P., Sadowsky, M. J. and Tseng, C. C. (2010). Laser imaging for rapid Microbial Source Tracking. Int J Comput Biol Drug Des 3(3): 177-186.
  82. Branca, A., Paape, T. D., Zhou, P., Briskine, R., Farmer, A. D., Mudge, J., Bharti, A. K., Woodward, J. E., May, G. D., Gentzbittel, L., Ben, C., Denny, R., Sadowsky, M. J., Ronfort, J., Bataillon, T., Young, N. D. and Tiffin, P. (2011). Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proc Natl Acad Sci U S A 108(42): E864-870.
  83. Hansen, D. L., Ishii, S., Sadowsky, M. J. and Hicks, R. E. (2011). Waterfowl abundance does not predict the dominant avian source of beach Escherichia coli. J Environ Qual 40(6): 1924-1931.
  84. Bardaweel, S., Ghosh, B., Chou, T. F., Sadowsky, M. J. and Wagner, C. R. (2011). E. coli histidine triad nucleotide binding protein 1 (ecHinT) is a catalytic regulator of D-alanine dehydrogenase (DadA) activity in vivo. PLoS One 6(7): e20897.
  85. Cameron, S. M., Durchschein, K., Richman, J. E., Sadowsky, M. J. and Wackett, L. P. (2011). A New family of biuret hydrolases involved in s-triazine ring metabolism. ACS Catal 2011(1): 1075-1082.
  86. Unno, T., Han, D., Jang, J., Widmer, K., Ko, G., Sadowsky, M. J. and Hur, H. G. (2011). Genotypic and phenotypic trends in antibiotic resistant pathogenic Escherichia coli isolated from humans and farm animals in South Korea. Microbes Environ 26(3): 198-204. 
  87. Jiang, S., Kim, M. G., Kim, S. J., Jung, H. S., Lee, S. W., Noh do, Y., Sadowsky, M. J. and Hur, H. G. (2011). Bacterial formation of extracellular U(VI) nanowires. Chem Commun (Camb) 47(28): 8076-8078.
  88. Kim, J., Sadowsky, M. J. and Hur, H. G. (2011). Simultaneous synthesis of temperature-tunable peptide and gold nanoparticle hybrid spheres. Biomacromolecules 12(7): 2518-2523. 
  89. Han, D., Unno, T., Jang, J., Lim, K., Lee, S. N., Ko, G., Sadowsky, M. J. and Hur, H. G. (2011). The occurrence of virulence traits among high-level aminoglycosides resistant Enterococcus isolates obtained from feces of humans, animals, and birds in South Korea. Int J Food Microbiol 144(3): 387-392.
  90. Jang, J., Unno, T., Lee, S. W., Cho, K. H., Sadowsky, M. J., Ko, G., Kim, J. H. and Hur, H. G. (2011). Prevalence of season-specific Escherichia coli strains in the Yeongsan River Basin of South Korea. Environ Microbiol 13(12): 3103-3113.
  91. Sugawara, M., Shah, G. R., Sadowsky, M. J., Paliy, O., Speck, J., Vail, A. W. and Gyaneshwar, P. (2011). Expression and functional roles of Bradyrhizobium japonicum genes involved in the utilization of inorganic and organic sulfur compounds in free-living and symbiotic conditions. Mol Plant Microbe Interact 24(4): 451-457.
  92. Munoz, A., Koskinen, W. C., Cox, L. and Sadowsky, M. J. (2011). Biodegradation and mineralization of metolachlor and alachlor by Candida xestobii. J Agric Food Chem 59(2): 619-627.
  93. Pujol Pereira, E. I., Chung, H., Scow, K., Sadowsky, M. J., van Kessel, C. and Six, J. (2011). Soil nitrogen transformations under elevated atmospheric CO(2) and O(3) during the soybean growing season. Environ Pollut 159(2): 401-407.
  94. Heilmann, S. M., Jader, L. R., Sadowsky, M. J., Schendel, F. J., von Keitz, M. G. and Valentas, K. J. (2011). Hydrothermal carbonization of distiller’s grains. Biomass & Bioenergy 35:2526-2533.
  95. Heilmann, S. M., Jader, L. R., Harned, L. A., Sadowsky, M. J., Schendela, F. J., Lefebvre, P. A., von Keitz, M. G. and Valentas, K. J. (2011). Hydrothermal carbonization of microalgae II. Fatty acid, char, and algal nutrient products. Applied Energy 88: 3286–3290.
  96. Jiang, S., Liu, F. , Kim, M. G., Lim, J. H., Lee, K. J., Cho, Y. H., Song, K., Sadowsky, M. J., Chen, W., Myung, N. V. and Hur, H. G. (2011). Synthesis of chalcogenide ternary and quaternary nanotubes through directed compositional alterations of bacterial As-S nanotubes. Mater Chem 21:10277-10279.
  97. Khoruts, A. and Sadowsky, M. J. (2011). Therapeutic transplantation of the distal gut microbiota. Mucosal Immunol 4(1): 4-7.
  98. Badgley, B. D., Ferguson, J., Vanden Heuvel, A., Kleinheinz, G. T., McDermott, C. M., Sandrin, T. R., Kinzelman, J., Junion, E. A., Byappanahalli, M. N., Whitman, R. L. and Sadowsky, M. J. (2011). Multi-scale temporal and spatial variation in genotypic composition of Cladophora-borne Escherichia coli populations in Lake Michigan. Water Res 45(2): 721-731.
  99. Hamilton, M. J., Hadi, A. Z., Griffith, J. F., Ishii, S. and Sadowsky, M. J. (2010). Large scale analysis of virulence genes in Escherichia coli strains isolated from Avalon Bay, CA. Water Res 44(18): 5463-5473.
  100. Unno, T., Jang, J., Han, D., Kim, J. H., Sadowsky, M. J., Kim, O. S., Chun, J. and Hur, H. G. (2010). Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds. Environ Sci Technol 44(20): 7777-7782. 
  101. Hamilton, M. J. and Sadowsky, M. J. (2010). DNA Profiling in Ecology. 2010. Encyclopedia of Life Sciences a0005454.
  102. Brechenmacher, L., Lei, Z., Libault, M., Findley, S., Sugawara, M., Sadowsky, M. J., Sumner, L. W. and Stacey, G. (2010). Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant Physiol 153(4): 1808-1822.
  103. Seffernick, J. L., Reynolds, E., Fedorov, A. A., Fedorov, E., Almo, S. C., Sadowsky, M. J. and Wackett, L. P. (2010). X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN. J Biol Chem 285(40): 30606-30614.
  104. Seffernick, J. L., Dodge, A. G., Sadowsky, M. J., Bumpus, J. A. and Wackett, L. P. (2010). Bacterial ammeline metabolism via guanine deaminase. J Bacteriol 192(4): 1106-1112.
  105. Kim, J., Rheem, Y., Yoo, B., Chong, Y., Bozhilov, K. N., Kim, D., Sadowsky, M. J., Hur, H. G. and Myung, N. V. (2010). Peptide-mediated shape- and size-tunable synthesis of gold nanostructures. Acta Biomater 6(7): 2681-2689.
  106. Ho, C. T., Kim, J. W., Kim, W. B., Song, K., Kanaly, R. A., Sadowsky, M. J. and Hur, H. G. (2010). Shewanella-mediated synthesis of selenium nanowires and Nanoribbons. J Mat Chem 20:5899-5905.
  107. Unno, T., Han, D., Jang, J., Lee, S. N., Kim, J. H., Ko, G., Kim, B. G., Ahn, J. H., Kanaly, R. A., Sadowsky, M. J. and Hur, H. G. (2010). High diversity and abundance of antibiotic-resistant Escherichia coli isolated from humans and farm animal hosts in Jeonnam Province, South Korea. Sci Total Environ 408(17): 3499-3506.
  108. Sugawara, M., Cytryn, E. J. and Sadowsky, M. J. (2010). Functional role of Bradyrhizobium japonicum trehalose biosynthesis and metabolism genes during physiological stress and nodulation. Appl Environ Microbiol 76(4): 1071-1081.
  109. Heilmann, S. M., Davis, H. T., Jader, L. R., Lefebvre, P. A., Sadowsky, M. J., Schendel, F. J., von Keitz, M. G. and Valentas, K. J. (2010). Hydrothermal carbonization of microalgae. Biomass and Bioenergy 34:875-882.
  110. Ishii, S., Yan, T., Vu, H., Hansen, D. L., Hicks, R. E. and Sadowsky, M. J. (2010). Factors controlling long-term survival and growth of naturalized Escherichia coli populations in temperate field soils. Microbes Environ 25(1): 8-14.
  111. Vanden Heuvel, A., McDermott, C., Pillsbury, R., Sandrin, T., Kinzelman, J., Ferguson, J., Sadowsky, M., Byappanahalli, M., Whitman, R. and Kleinheinz, G. T. (2010). The green alga, Cladophora, promotes Escherichia coli growth and contamination of recreational waters in Lake Michigan. J Environ Qual 39(1): 333-344.
  112. Preecha, C., Sadowsky, M. J. and Prathuangwong, S. (2010). Lipopeptide surfactin produced by Bacillus amyloliquefaciens KPS46 is required for biocontrol efficacy against Xanthomonas axonopodis pv. Glycines. Kasetsart J. Nat Sci 44:84-99.
  113. Jareonmit, P., Sajjaphan, K. and Sadowsky, M. J. (2010). Structure and diversity of arsenic resistant bacteria in an old tin mine area of Thailand. J Microbiol Biotechnol 20(1): 169-178. 
  114. Sajjaphan, K., Heepngoen, P., Sadowsky, M. J. and Boonkerd, N. (2010). Arthrobacter sp. strain KU001 isolated from a Thai soil degrades atrazine in the presence of inorganic nitrogen sources. J Microbiol Biotechnol 20(3): 602-608.
  115. Ryu, J. Y., Seo, J., Unno, T., Ahn, J. H., Yan, T., Sadowsky, M. J. and Hur, H. G. (2010). Isoeugenol monooxygenase and its putative regulatory gene are located in the eugenol metabolic gene cluster in Pseudomonas nitroreducens Jin1. Arch Microbiol 192(3): 201-209.
  116. Weidhaas, J. L., Macbeth, T. W., Olsen, R. L., Sadowsky, M. J., Norat, D. and Harwood, V. J. (2010). Identification of a Brevibacterium marker gene specific to poultry litter and development of a quantitative PCR assay. J Appl Microbiol 109(1): 334-347.
  117. Khoruts, A., Dicksved, J., Jansson, J. K. and Sadowsky, M. J. (2010). Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea. J Clin Gastroenterol 44(5): 354-360.
Protocols by Michael J. Sadowksy
  1. Evaluation of Nodulation Speed by Sinorhizobium Strains
  2. Quantitative Evaluation of Competitive Nodulation among Different Sinorhizobium Strains