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Roger W. Innes

Education

Ph.D. in Molecular, Cellular and Developmental Biology, Department of Molecular, Cellular and Developemental Biology, University of Colorado, Boulder, Colorado, 1987

Current position

Professor of Biology and Director of Indiana University Bloomington Electron Microscopy Center, Indiana University, Bloomington, Indiana, USA

Publications (since 2005)

  1. Qi, D., Dubiella, U., Kim, S. H., Sloss, D. I., Dowen, R. H., Dixon, J. E. and Innes, R. W. (2014). Recognition of the protein kinase AVRPPHB SUSCEPTIBLE1 by the disease resistance protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 is dependent on s-acylation and an exposed loop in AVRPPHB SUSCEPTIBLE1. Plant Physiol 164(1): 340-351.
  2. Karasov, T. L., Kniskern, J. M., Gao, L., DeYoung, B. J., Ding, J., Dubiella, U., Lastra, R. O., Nallu, S., Roux, F., Innes, R. W., Barrett, L. G., Hudson, R. R. and Bergelson, J. (2014). The long-term maintenance of a resistance polymorphism through diffuse interactions. Nature 512(7515): 436-440.
  3. Ashfield, T., Redditt, T., Russell, A., Kessens, R., Rodibaugh, N., Galloway, L., Kang, Q., Podicheti, R. and Innes, R. W. (2014). Evolutionary relationship of disease resistance genes in soybean and Arabidopsis specific for the Pseudomonas syringae effectors AvrB and AvrRpm1. Plant Physiol 166(1): 235-251.
  4. Kessens, R., Ashfield, T., Kim, S. H. and Innes, R. W. (2014). Determining the GmRIN4 requirements of the soybean disease resistance proteins Rpg1b and Rpg1r using a nicotiana glutinosa-based agroinfiltration system. PLoS One 9(9): e108159.
  5. Qi, D. and Innes, R. W. (2013). Recent advances in plant NLR structure, function, localization, and signaling. Front Immunol 4: 348. (Invited review)
  6. Qi, D., DeYoung, B. J. and Innes, R. W. (2012). Structure-function analysis of the coiled-coil and leucine-rich repeat domains of the RPS5 disease resistance protein. Plant Physiol 158(4): 1819-1832.
  7. Ashfield, T., Egan, A. N., Pfeil, B. E., Chen, N. W., Podicheti, R., Ratnaparkhe, M. B., Ameline-Torregrosa, C., Denny, R., Cannon, S., Doyle, J. J., Geffroy, V., Roe, B. A., Saghai Maroof, M. A., Young, N. D. and Innes, R. W. (2012). Evolution of a complex disease resistance gene cluster in diploid Phaseolus and tetraploid Glycine. Plant Physiol 159(1): 336-354.
  8. DeYoung, B. J., Qi, D., Kim, S. H., Burke, T. P. and Innes, R. W. (2012). Activation of a plant nucleotide binding-leucine rich repeat disease resistance protein by a modified self protein. Cell Microbiol 14(7): 1071-1084.
  9. Gu, Y. and Innes, R. W. (2012). The KEEP ON GOING protein of Arabidopsis regulates intracellular protein trafficking and is degraded during fungal infection. Plant Cell 24(11): 4717-4730.
  10. Innes, R. W. (2011). Activation of plant nod-like receptors: how indirect can it be? Cell Host Microbe 9(2): 87-89. (invited commentary)
  11. Christiansen, K. M., Gu, Y., Rodibaugh, N. and Innes, R. W. (2011). Negative regulation of defence signalling pathways by the EDR1 protein kinase. Mol Plant Pathol 12(8): 746-758.
  12. Gu, Y. and Innes, R. W. (2011). The KEEP ON GOING protein of Arabidopsis recruits the ENHANCED DISEASE RESISTANCE1 protein to trans-Golgi network/early endosome vesicles. Plant Physiol 155(4): 1827-1838..
  13. Cui, H., Wang, Y., Xue, L., Chu, J., Yan, C., Fu, J., Chen, M., Innes, R. W. and Zhou, J. M. (2010). Pseudomonas syringae effector protein AvrB perturbs Arabidopsis hormone signaling by activating MAP kinase 4. Cell Host Microbe 7(2): 164-175.
  14. Wawrzynska, A., Rodibaugh, N. L. and Innes, R. W. (2010). Synergistic activation of defense responses in Arabidopsis by simultaneous loss of the GSL5 callose synthase and the EDR1 protein kinase. Mol Plant Microbe Interact 23(5): 578-584.
  15. Innes, R. W. (2010). The best defence. International Innovation 57-59. (Solicited interview highlighting my NIH-funded research)
  16. Chen, N. W., Sevignac, M., Thareau, V., Magdelenat, G., David, P., Ashfield, T., Innes, R. W. and Geffroy, V. (2010). Specific resistances against Pseudomonas syringae effectors AvrB and AvrRpm1 have evolved differently in common bean (Phaseolus vulgaris), soybean (Glycine max), and Arabidopsis thaliana. New Phytol 187(4): 941-956.
  17. Innes, R. W., Ameline-Torregrosa, C., Ashfield, T., Cannon, E., Cannon, S. B., Chacko, B., Chen, N. W., Couloux, A., Dalwani, A., Denny, R., Deshpande, S., Egan, A. N., Glover, N., Hans, C. S., Howell, S., Ilut, D., Jackson, S., Lai, H., Mammadov, J., Del Campo, S. M., Metcalf, M., Nguyen, A., O'Bleness, M., Pfeil, B. E., Podicheti, R., Ratnaparkhe, M. B., Samain, S., Sanders, I., Segurens, B., Sevignac, M., Sherman-Broyles, S., Thareau, V., Tucker, D. M., Walling, J., Wawrzynski, A., Yi, J., Doyle, J. J., Geffroy, V., Roe, B. A., Maroof, M. A. and Young, N. D. (2008). Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean. Plant Physiol 148(4): 1740-1759.
  18. Wawrzynska, A., Christiansen, K. M., Lan, Y., Rodibaugh, N. L. and Innes, R. W. (2008). Powdery mildew resistance conferred by loss of the ENHANCED DISEASE RESISTANCE1 protein kinase is suppressed by a missense mutation in KEEP ON GOING, a regulator of abscisic acid signaling. Plant Physiol 148(3): 1510-1522.
  19. Wawrzynski, A., Ashfield, T., Chen, N. W., Mammadov, J., Nguyen, A., Podicheti, R., Cannon, S. B., Thareau, V., Ameline-Torregrosa, C., Cannon, E., Chacko, B., Couloux, A., Dalwani, A., Denny, R., Deshpande, S., Egan, A. N., Glover, N., Howell, S., Ilut, D., Lai, H., Del Campo, S. M., Metcalf, M., O'Bleness, M., Pfeil, B. E., Ratnaparkhe, M. B., Samain, S., Sanders, I., Segurens, B., Sevignac, M., Sherman-Broyles, S., Tucker, D. M., Yi, J., Doyle, J. J., Geffroy, V., Roe, B. A., Maroof, M. A., Young, N. D. and Innes, R. W. (2008). Replication of nonautonomous retroelements in soybean appears to be both recent and common. Plant Physiol 148(4): 1760-1771.
  20. Ade, J., DeYoung, B. J., Golstein, C. and Innes, R. W. (2007). Indirect activation of a plant nucleotide binding site-leucine-rich repeat protein by a bacterial protease. Proc Natl Acad Sci U S A 104(7): 2531-2536.
  21. Nobuta, K., Okrent, R. A., Stoutemyer, M., Rodibaugh, N., Kempema, L., Wildermuth, M. C. and Innes, R. W. (2007). The GH3 acyl adenylase family member PBS3 regulates salicylic acid-dependent defense responses in Arabidopsis. Plant Physiol 144(2): 1144-1156.
  22. Tang, D., Simonich, M. T. and Innes, R. W. (2007). Mutations in LACS2, a long-chain acyl-coenzyme A synthetase, enhance susceptibility to avirulent Pseudomonas syringae but confer resistance to Botrytis cinerea in Arabidopsis. Plant Physiol 144(2): 1093-1103.
  23. Ade, J. and Innes, R. W. (2007). Resistance to bacterial pathogens in plants. eLS. (Invited review)
  24. DeYoung, B. J. and Innes, R. W. (2007). The rules of engagement. The XIII International Congress on Molecular Plant-Microbe Interactions, Sorrento, Italy, July 2007. New Phytol 176(3): 506-510. (Invited meeting summary)
  25. Tang, D., Ade, J., Frye, C. A. and Innes, R. W. (2006). A mutation in the GTP hydrolysis site of Arabidopsis dynamin-related protein 1E confers enhanced cell death in response to powdery mildew infection. Plant J 47(1): 75-84.
  26. Ong, L. E. and Innes, R. W. (2006). AvrB mutants lose both virulence and avirulence activities on soybean and Arabidopsis. Mol Microbiol 60(4): 951-962.
  27. DeYoung, B. J. and Innes, R. W. (2006). Plant NBS-LRR proteins in pathogen sensing and host defense. Nat Immunol 7(12): 1243-1249. (Invited review)
  28. Nobuta, K., Ashfield, T., Kim, S. and Innes, R. W. (2005). Diversification of non-TIR class NB-LRR genes in relation to whole-genome duplication events in Arabidopsis. Mol Plant Microbe Interact 18(2): 103-109.
  29. Tang, D., Christiansen, K. M. and Innes, R. W. (2005). Regulation of plant disease resistance, stress responses, cell death, and ethylene signaling in Arabidopsis by the EDR1 protein kinase. Plant Physiol 138(2): 1018-1026.
  30. Tang, D., Ade, J., Frye, C. A. and Innes, R. W. (2005). Regulation of plant defense responses in Arabidopsis by EDR2, a PH and START domain-containing protein. Plant J 44(2): 245-257.
Protocols by Roger W. Innes
  1. In vitro Detection of S-acylation on Recombinant Proteins via the Biotin-Switch Technique