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Anireddy S. N. Reddy

Education

Ph.D. in Plant Molecular Biology, School of Life Sciences, Jawaharlal Nehru University, New Delhi, India, 1984

Current position

Professor, Department of Biology, Program in Molecular Plant Biology and Program Cell and Molecular Biology, Colorado State University, Fort Collins, USA

Publications (since 2007)

  1. Reddy, A. S., Marquez, Y., Kalyna, M. and Barta, A. (2013). Complexity of the Alternative Splicing Landscape in Plants. Plant Cell.
  2.  Abdel-Ghany, S. E., Day, I., Heuberger, A. L., Broeckling, C. D. and Reddy, A. S. (2013). Metabolic engineering of Arabidopsis for butanetriol production using bacterial genes. Metab Eng 20C: 109-120.
  3.  Lazzaro, M. D., Marom, E. Y. and Reddy, A. S. (2013). Polarized cell growth, organelle motility, and cytoskeletal organization in conifer pollen tube tips are regulated by KCBP, the calmodulin-binding kinesin. Planta 238(3): 587-597.
  4.  Celesnik, H., Ali, G. S., Robison, F. M. and Reddy, A. S. (2013). Arabidopsis thaliana VOZ (Vascular plant One-Zinc finger) transcription factors are required for proper regulation of flowering time. Biol Open 2(4): 424-431.
  5.  Laluk, K., Prasad, K., Savchenko, T., Celesnik, H., Dehesh, K., Levy, M., Mitchell-Olds, T. and Reddy, A. (2012). The calmodulin-binding transcription factor SIGNAL RESPONSIVE1 is a novel regulator of glucosinolate metabolism and herbivory tolerance in Arabidopsis. Plant and Cell Physiology 53(12): 2008-2015.
  6.  Thomas, J., Palusa, S. G., Prasad, K. V., Ali, G. S., Surabhi, G. K., Ben-Hur, A., Abdel-Ghany, S. E. and Reddy, A. S. (2012). Identification of an intronic splicing regulatory element involved in auto-regulation of alternative splicing of SCL33 pre-mRNA. Plant J.
  7.  Day, I. S., Golovkin, M., Palusa, S. G., Link, A., Ali, G. S., Thomas, J., Richardson, D. N. and Reddy, A. S. (2012). Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing. Plant J 71(6): 936-947.
  8.  Rogers, M. F., Thomas, J., Reddy, A. S. and Ben-Hur, A. (2012). SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data. Genome Biol 13(1): R4.
  9.  Reddy, A. S., Rogers, M. F., Richardson, D. N., Hamilton, M. and Ben-Hur, A. (2012). Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements. Front Plant Sci 3: 18.
  10.  Cheung, A. Y. and Reddy, A. S. (2012). Nuclear architecture and dynamics: territories, nuclear bodies, and nucleocytoplasmic trafficking. Plant Physiol 158(1): 23-25.
  11.  Reddy, A. S., Day, I. S., Gohring, J. and Barta, A. (2012). Localization and dynamics of nuclear speckles in plants. Plant physiology 158(1): 67-77.
  12.  Reddy, A. S., Ali, G. S., Celesnik, H. and Day, I. S. (2011). Coping with stresses: roles of calcium- and calcium/calmodulin-regulated gene expression. Plant Cell 23(6): 2010-2032.
  13.  Richardson, D. N., Rogers, M. F., Labadorf, A., Ben-Hur, A., Guo, H., Paterson, A. H. and Reddy, A. S. (2011). Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing. PLoS One 6(9): e24542.
  14.  Hamilton, M., Reddy, A. and Ben-Hur, A. (2011). Kernel methods for Calmodulin binding and binding site prediction. Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM.
  15.  Reddy, A. and Day, I. S. (2011). Calcium Signaling in Plants. Indian Journal of Agricultural Biochemistry 24(1): 1-16.
  16.  Reddy, A. S. and Shad Ali, G. (2011). Plant serine/arginine-rich proteins: roles in precursor messenger RNA splicing, plant development, and stress responses. Wiley Interdiscip Rev RNA 2(6): 875-889.
  17.  Reddy, A. S., Ben-Hur, A. and Day, I. S. (2011). Experimental and computational approaches for the study of calmodulin interactions. Phytochemistry 72(10): 1007-1019.
  18.  Irene S. Day. and Reddy, A. S. N. (2011). Elucidation of calcium signaling components and networks, In Coding and Decoding of Calcium Signals in Plants. Springer 147-176.
  19.  Reddy, A. S. N. and Day, I. (2011). Microtubule motor proteins in the eukaryotic green lineage: Functions and regulation. In The Plant Cytoskeleton, Advances in Plant Biology 2, Springer. Pages 119-141.
  20.  Barta, A., Kalyna, M. and Reddy, A. S. (2010). Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants. Plant Cell 22(9): 2926-2929.
  21.  Labadorf, A., Link, A., Rogers, M. F., Thomas, J., Reddy, A. S. and Ben-Hur, A. (2010). Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii. BMC Genomics 11: 114.
  22.  Yang, T., Shad Ali, G., Yang, L., Du, L., Reddy, A. S. and Poovaiah, B. W. (2010). Calcium/calmodulin-regulated receptor-like kinase CRLK1 interacts with MEKK1 in plants. Plant Signal Behav 5(8): 991-994.
  23.  Palusa, S. G. and Reddy, A. S. (2010). Extensive coupling of alternative splicing of pre-mRNAs of serine/arginine (SR) genes with nonsense-mediated decay. New Phytol 185(1): 83-89.
  24.  Vinogradova, M. V., Malanina, G. G., Reddy, A. S. and Fletterick, R. J. (2009). Structure of the complex of a mitotic kinesin with its calcium binding regulator. Proc Natl Acad Sci U S A 106(20): 8175-8179.
  25.  Du, L., Ali, G. S., Simons, K. A., Hou, J., Yang, T., Reddy, A. S. and Poovaiah, B. W. (2009). Ca(2+)/calmodulin regulates salicylic-acid-mediated plant immunity. Nature 457(7233): 1154-1158.
  26.  Vinogradova, M. V., Malanina, G. G., Reddy, V. S., Reddy, A. S. and Fletterick, R. J. (2008). Structural dynamics of the microtubule binding and regulatory elements in the kinesin-like calmodulin binding protein. J Struct Biol 163(1): 76-83.
  27.  Schindler, S., Szafranski, K., Hiller, M., Ali, G. S., Palusa, S. G., Backofen, R., Platzer, M. and Reddy, A. S. (2008). Alternative splicing at NAGNAG acceptors in Arabidopsis thaliana SR and SR-related protein-coding genes. BMC Genomics 9: 159.
  28.  Ali, G. S., Prasad, K. V., Hanumappa, M. and Reddy, A. S. (2008). Analyses of in vivo interaction and mobility of two spliceosomal proteins using FRAP and BiFC. PLoS One 3(4): e1953.
  29.  Day, I. and Reddy, A. S. N. (2008). Proteomic Approaches to Construct Calcium Signaling Networks in Plants. In: Plant Proteomics: Technologies, Strategies, and Applications. Wiley Publisher, pages 645-657.
  30.  Ali, G. S. and Reddy, A. (2008). PAMP-triggered immunity: Early events in the activation of FLAGELLIN SENSITIVE2. Plant signaling & behavior 3(6): 423-426.
  31.  Ali, G. S. and Reddy, A. S. (2008). Spatiotemporal organization of pre-mRNA splicing proteins in plants. Curr Top Microbiol Immunol 326: 103-118.
  32.  Simmons, M. P., Richardson, D. and Reddy, A. S. (2008). Incorporation of gap characters and lineage‐specific regions into phylogenetic analyses of gene families from divergent clades: an example from the kinesin superfamily across eukaryotes. Cladistics 24(3): 372-384.
  33.  Ali, G. S. and Reddy, A. S. (2008). Regulation of alternative splicing of pre-mRNAs by stresses. Curr Top Microbiol Immunol 326: 257-275.
  34.  Reddy, A. S. (2007). Alternative splicing of pre-messenger RNAs in plants in the genomic era. Annu Rev Plant Biol 58: 267-294.
  35.  Ali, G. S., Prasad, K. V., Day, I. and Reddy, A. S. (2007). Ligand-dependent reduction in the membrane mobility of FLAGELLIN SENSITIVE2, an arabidopsis receptor-like kinase. Plant Cell Physiol 48(11): 1601-1611.
  36.  Palusa, S. G., Ali, G. S. and Reddy, A. S. (2007). Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses. Plant J 49(6): 1091-1107.
  37.  Ali, G. S., Palusa, S. G., Golovkin, M., Prasad, J., Manley, J. L. and Reddy, A. S. (2007). Regulation of plant developmental processes by a novel splicing factor. PLoS One 2(5): e471.
  38.  Palusa, S. G., Golovkin, M., Shin, S. B., Richardson, D. N. and Reddy, A. S. (2007). Organ-specific, developmental, hormonal and stress regulation of expression of putative pectate lyase genes in Arabidopsis. New Phytol 174(3): 537-550..
  39.  Reddy, A. S. (2007). Analysis of calcium/calmodulin regulation of a plant kinesin using co-sedimentation and ATPase assays. Methods Mol Biol 392: 23-36.
Protocols by Anireddy S. N. Reddy
  1. Analysis of RNA-protein Interactions Using Electrophoretic Mobility Shift Assay (Gel Shift Assay)