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Coauthors
Myriam Gorospe Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Biomedical Research Center, USA
2 protocols

Jennifer Martindale Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Biomedical Research Center, USA
2 protocols

Amaresh C. Panda
  • Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Biomedical Research Center, USA
Contributions
  • 2 Author merit

Education

Ph.D, National Centre for Cell Science, University of Pune, INDIA, 2011

Current position

Postdoctoral Fellow , Laboratory of Genetics, National Institute on Aging, National Institutes of Health (NIH), USA

Publications

  1. Panda, A. C., Abdelmohsen, K. and Gorospe, M. (2017). RT-qPCR Detection of Senescence-Associated Circular RNAs. Methods Mol Biol 1534: 79-87.
  2. Di Francesco, A., Di Germanio, C., Panda, A. C., Huynh, P., Peaden, R., Navas-Enamorado, I., Bastian, P., Lehrmann, E., Diaz-Ruiz, A., Ross, D., Siegel, D., Martindale, J. L., Bernier, M., Gorospe, M., Abdelmohsen, K. and de Cabo, R. (2016). Novel RNA-binding activity of NQO1 promotes SERPINA1 mRNA translation. Free Radic Biol Med 99: 225-233.
  3. Panda, A. C., Grammatikakis, I., Munk, R., Gorospe, M. and Abdelmohsen, K. (2016). Emerging roles and context of circular RNAs. Wiley Interdiscip Rev RNA.
  4. Noh, J. H., Kim, K. M., Abdelmohsen, K., Yoon, J. H., Panda, A. C., Munk, R., Kim, J., Curtis, J., Moad, C. A., Wohler, C. M., Indig, F. E., de Paula, W., Dudekula, D. B., De, S., Piao, Y., Yang, X., Martindale, J. L., de Cabo, R. and Gorospe, M. (2016). HuR and GRSF1 modulate the nuclear export and mitochondrial localization of the lncRNA RMRP. Genes Dev 30(10): 1224-1239.
  5. Grammatikakis, I., Zhang, P., Panda, A. C., Kim, J., Maudsley, S., Abdelmohsen, K., Yang, X., Martindale, J. L., Motino, O., Hutchison, E. R., Mattson, M. P. and Gorospe, M. (2016). Alternative Splicing of Neuronal Differentiation Factor TRF2 Regulated by HNRNPH1/H2. Cell Rep 15(5): 926-934.
  6. Panda, A. C., Abdelmohsen, K., Martindale, J. L., Di Germanio, C., Yang, X., Grammatikakis, I., Noh, J. H., Zhang, Y., Lehrmann, E., Dudekula, D. B., De, S., Becker, K. G., White, E. J., Wilson, G. M., de Cabo, R. and Gorospe, M. (2016). Novel RNA-binding activity of MYF5 enhances Ccnd1/Cyclin D1 mRNA translation during myogenesis. Nucleic Acids Res 44(5): 2393-2408.
  7. Dudekula, D. B., Panda, A. C., Grammatikakis, I., De, S., Abdelmohsen, K. and Gorospe, M. (2016). CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs. RNA Biol 13(1): 34-42.
  8. Abdelmohsen, K., Panda, A. C., De, S., Grammatikakis, I., Kim, J., Ding, J., Noh, J. H., Kim, K. M., Mattison, J. A., de Cabo, R. and Gorospe, M. (2015). Circular RNAs in monkey muscle: age-dependent changes. Aging (Albany NY) 7(11): 903-910.
  9. Lee, K. P., Shin, Y. J., Panda, A. C., Abdelmohsen, K., Kim, J. Y., Lee, S. M., Bahn, Y. J., Choi, J. Y., Kwon, E. S., Baek, S. J., Kim, S. Y., Gorospe, M. and Kwon, K. S. (2015). miR-431 promotes differentiation and regeneration of old skeletal muscle by targeting Smad4. Genes Dev 29(15): 1605-1617.
  10. Grammatikakis, I., Panda, A. C., Abdelmohsen, K. and Gorospe, M. (2014). Long noncoding RNAs(lncRNAs) and the molecular hallmarks of aging. Aging (Albany NY) 6(12): 992-1009.
  11. Abdelmohsen, K., Panda, A. C., Kang, M. J., Guo, R., Kim, J., Grammatikakis, I., Yoon, J. H., Dudekula, D. B., Noh, J. H., Yang, X., Martindale, J. L. and Gorospe, M. (2014). 7SL RNA represses p53 translation by competing with HuR. Nucleic Acids Res 42(15): 10099-10111.
  12. Panda, A. C., Abdelmohsen, K., Yoon, J. H., Martindale, J. L., Yang, X., Curtis, J., Mercken, E. M., Chenette, D. M., Zhang, Y., Schneider, R. J., Becker, K. G., de Cabo, R. and Gorospe, M. (2014). RNA-binding protein AUF1 promotes myogenesis by regulating MEF2C expression levels. Mol Cell Biol 34(16): 3106-3119.
  13. Panda, A. C., Sahu, I., Kulkarni, S. D., Martindale, J. L., Abdelmohsen, K., Vindu, A., Joseph, J., Gorospe, M. and Seshadri, V. (2014). miR-196b-mediated translation regulation of mouse insulin2 via the 5'UTR. PLoS One 9(7): e101084.
  14. Abdelmohsen, K., Panda, A., Kang, M. J., Xu, J., Selimyan, R., Yoon, J. H., Martindale, J. L., De, S., Wood, W. H., Becker, K. G. and Gorospe, M. (2013). Senescence‐associated lncRNAs: senescence‐associated long noncoding RNAs. Aging Cell 12(5): 890-900.
  15. Panda, A. C., Grammatikakis, I., Yoon, J. H. and Abdelmohsen, K. (2013). Posttranscriptional regulation of insulin family ligands and receptors. Int J Mol Sci 14(9): 19202-19229.
  16. Chatterjee, S., Panda, A. C., Berwal, S. K., Sreejith, R. K., Ritvika, C., Seshadri, V. and Pal, J. K. (2013). Vimentin is a component of a complex that binds to the 5'-UTR of human heme-regulated eIF2alpha kinase mRNA and regulates its translation. FEBS Lett 587(5): 474-480.
  17. Kulkarni, S. D., Muralidharan, B., Panda, A. C., Bakthavachalu, B., Vindu, A. and Seshadri, V. (2011). Glucose-stimulated translation regulation of insulin by the 5' UTR-binding proteins. J Biol Chem 286(16): 14146-14156.
  18. Panda, A. C., Kulkarni, S. D., Muralidharan, B., Bakthavachalu, B. and Seshadri, V. (2010). Novel splice variant of mouse insulin2 mRNA: implications for insulin expression. FEBS Lett 584(6): 1169-1173.
2 Protocols published
Polysome Fractionation to Analyze mRNA Distribution Profiles
Authors:  Amaresh C. Panda, Jennifer L. Martindale and Myriam Gorospe, date: 02/05/2017, view: 2745, Q&A: 0
Eukaryotic cells adapt to changes in external or internal signals by precisely modulating the expression of specific gene products. The expression of protein-coding genes is controlled at the transcriptional and post-transcriptional levels. Among ...
Affinity Pulldown of Biotinylated RNA for Detection of Protein-RNA Complexes
Authors:  Amaresh C Panda, Jennifer L. Martindale and Myriam Gorospe, date: 12/20/2016, view: 3069, Q&A: 0
RNA-binding proteins (RBPs) have recently emerged as crucial players in the regulation of gene expression. The interactions of RBPs with target mRNAs control the levels of gene products by altering different regulatory steps, including pre-mRNA ...