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Aksiniya Asenova University of California, Davis
10 protocols

Alba Blesa Universidad Francisco de Vitoria
2 protocols

Alexander Westbye NIOZ Royal Netherlands Institute for Sea Research
5 protocols

Amit Dey Regional Centre for Biotechnology
9 protocols

Editor
Valentine V Trotter
  • Post-Doc, Lawrence Berkeley National Laboratory
Research focus
  • Microbiology
  • Functional Genomics
Contributions
  • 3 Reviewer merit
  • 42 Editor merit

Education

PhD Molecular Microbiology and Biotechnology, Aix-Marseille Universite

Lab information

Gareth Butland Lab

Publications

- De León KB, Zane GM, Trotter VV, Krantz GP, Arkin AP, Butland GP, Walian PJ, Fields MW, Wall JD.Unintended Laboratory-Driven Evolution Reveals Genetic Requirements for Biofilm Formation by Desulfovibrio vulgaris Hildenborough. MBio vol. 8 no. 5 e01696-17

- Shatsky M, Allen S, Gold BL, Liu NL, Juba TR, Reveco SA, Elias DA, Prathapam R, He J, Yang W, Szakal ED, Liu H, Singer ME, Geller JT, Lam BR, Saini A, Trotter VV, Hall SC, Fisher SJ, Brenner SE, Chhabra SR, Hazen TC, Wall JD, Witkowska HE, Biggin MD, Chandonia JM, Butland G. Bacterial Interactomes: Interacting Protein Partners Share Similar Function and Are Validated in Independent Assays More Frequently Than Previously Reported. Mol Cell Proteomics. 15(5):1539-55.

- Korte, H. L., Saini, A., Trotter, V. V., Butland, G. P., Arkin, A. P. and Wall, J. D. (2015). Independence of nitrate and nitrite inhibition of Desulfovibrio vulgaris hildenborough and use of nitrite as a substrate for growth. Environ Sci Technol. 49(2):924-31

- Ferdinand, P. H., Borne, R., Trotter, V., Pages, S., Tardif, C., Fierobe, H. P. and Perret, S. (2013). Are cellulosome scaffolding protein CipC and CBM3-containing protein HycP, involved in adherence of Clostridium cellulolyticum to cellulose? PLoS One 8(7): e69360.

- Celik, H., Blouzard, J. C., Voigt, B., Becher, D., Trotter, V., Fierobe, H. P., Tardif, C., Pages, S. and de Philip, P. (2013). A two-component system (XydS/R) controls the expression of genes encoding CBM6-containing proteins in response to straw in Clostridium cellulolyticum. PLoS One 8(2): e56063.

- Fendri, I., Abdou, L., Trotter, V., Dedieu, L., Maamar, H., Minton, N. P. and Tardif, C. (2013). Regulation of cel genes of C. cellulolyticum: identification of GlyR2, a transcriptional regulator regulating cel5D gene expression. PLoS One 8(1): e44708.

- Trotter, V., Vinella, D., Loiseau, L., Ollagnier de Choudens, S., Fontecave, M. and Barras, F. (2009). The CsdA cysteine desulphurase promotes Fe/S biogenesis by recruiting Suf components and participates to a new sulphur transfer pathway by recruiting CsdL (ex-YgdL), a ubiquitin-modifying-like protein. Mol Microbiol 74(6): 1527-1542.

3 Protocols reviewed
Assessment of Brown Adipocyte Thermogenic Function by High-throughput Respirometry
Authors:  Kiana Mahdaviani, Ilan Benador and Orian Shirihai, date: 11/05/2015, view: 4285, Q&A: 0
Brown adipose tissue (BAT) has the unique ability to dramatically increase mitochondrial uncoupled fuel oxidation for thermogenesis in response to adrenergic stimulation. A key parameter in assessing brown adipocyte thermogenic capacity is ...
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A Phosphopeptide Purification Protocol for the Moss Physcomitrella paten
Authors:  Xiaoqin Wang and Yikun He, date: 07/20/2015, view: 2679, Q&A: 0
Protein phosphorylation is one of the most common post-translational modifications in eukaryotic cells and plays a critical role in a vast array of cellular processes. Efficient methods of protein extraction and phosphopeptide purification are ...
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42 Protocols edited
A Flow-assay for Farnesol Removal from Adherent Candida albicans Cultures
Authors:  Melanie Polke and Ilse D. Jacobsen, date: 10/05/2017, view: 398, Q&A: 0
Here, we describe a protocol for a continuous flow system for C. albicans cultures growing adherent to a plastic surface. The protocol was adapted from a previous method established to simulate blood flow on endothelial cells (Wilson and ...
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Digestion of Peptidoglycan and Analysis of Soluble Fragments
Authors:  Ryan E. Schaub and Joseph P. Dillard, date: 08/05/2017, view: 921, Q&A: 0
Peptidoglycan (murein) is a vital component of the cell wall of nearly all bacteria, composed of sugars linked by short peptides. This protocol describes the purification of macromolecular peptidoglycan from cultured bacteria and the analysis of ...
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